5QKZ
Group deposition of library data - Crystal Structure of EcDsbA after initial refinement with no ligand modelled (structure B12_2)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2018-04-18 |
| Detector | ADSC QUANTUM 210r |
| Wavelength(s) | 0.95370 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 117.771, 64.509, 74.437 |
| Unit cell angles | 90.00, 125.84, 90.00 |
Refinement procedure
| Resolution | 37.157 - 2.381 |
| R-factor | 0.2296 |
| Rwork | 0.227 |
| R-free | 0.27390 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.438 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.32) |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 47.730 | 47.730 | 2.470 |
| High resolution limit [Å] | 2.380 | 8.910 | 2.380 |
| Rmerge | 0.080 | 0.019 | 0.691 |
| Rmeas | 0.092 | 0.022 | 0.793 |
| Rpim | 0.044 | 0.011 | 0.385 |
| Total number of observations | 76060 | 1369 | 7908 |
| Number of reflections | 18280 | 369 | 1908 |
| <I/σ(I)> | 11.1 | 38.1 | 1.5 |
| Completeness [%] | 99.9 | 98.2 | 99.3 |
| Redundancy | 4.2 | 3.7 | 4.1 |
| CC(1/2) | 0.998 | 0.999 | 0.747 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 293 | 11-13% PEG 8000 5-7.5% GLYCEROL 1 MM CUCL2 100 MM SODIUM CACODYLATE |
