5QI3
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of human PARP14 Macrodomain 3 in complex with FMOPL000475a
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-03-04 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92819 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 34.493, 41.533, 110.868 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 55.500 - 1.050 |
| R-factor | 0.1408 |
| Rwork | 0.140 |
| R-free | 0.15760 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 4abl |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.390 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.31) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 29.290 | 29.290 | 1.080 |
| High resolution limit [Å] | 1.050 | 4.700 | 1.050 |
| Rmerge | 0.065 | 0.079 | 0.137 |
| Rmeas | 0.071 | 0.087 | 0.194 |
| Rpim | 0.028 | 0.037 | 0.137 |
| Total number of observations | 291361 | 5308 | 885 |
| Number of reflections | 60056 | ||
| <I/σ(I)> | 22.9 | 29.6 | 5.5 |
| Completeness [%] | 80.2 | 98.9 | 14.8 |
| Redundancy | 4.9 | 5.5 | 1.1 |
| CC(1/2) | 0.996 | 0.986 | 0.931 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 277 | 80 mM KBr, 30 % PEG2kMME |
