5QHO
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of human FAM83B in complex with FMOPL000010a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-08-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91587 |
Spacegroup name | P 41 2 2 |
Unit cell lengths | 50.520, 50.520, 152.856 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.520 - 1.660 |
R-factor | 0.1998 |
Rwork | 0.198 |
R-free | 0.23530 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5lzk |
RMSD bond length | 0.017 |
RMSD bond angle | 1.782 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.480 | 50.480 | 1.700 |
High resolution limit [Å] | 1.660 | 7.420 | 1.660 |
Rmerge | 0.055 | 0.022 | 2.061 |
Rmeas | 0.059 | 0.024 | 2.227 |
Rpim | 0.020 | 0.009 | 0.824 |
Total number of observations | 195256 | 2376 | 11894 |
Number of reflections | 24132 | ||
<I/σ(I)> | 13.7 | 53.3 | 1 |
Completeness [%] | 99.5 | 97.1 | 100 |
Redundancy | 8.1 | 7.2 | 6.8 |
CC(1/2) | 1.000 | 1.000 | 0.506 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 27.3% Tacsimate pH 7.0, 0.15 M NaCl |