5QHN
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of human FAM83B in complex with FMOPL000622a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-08-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91587 |
Spacegroup name | P 41 2 2 |
Unit cell lengths | 50.541, 50.541, 153.152 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.540 - 1.730 |
R-factor | 0.1895 |
Rwork | 0.187 |
R-free | 0.22650 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5lzk |
RMSD bond length | 0.021 |
RMSD bond angle | 2.151 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.510 | 50.510 | 1.770 |
High resolution limit [Å] | 1.730 | 7.740 | 1.730 |
Rmerge | 0.094 | 0.026 | 3.003 |
Rmeas | 0.100 | 0.028 | 3.216 |
Rpim | 0.033 | 0.010 | 1.113 |
Total number of observations | 174727 | 2170 | 11273 |
Number of reflections | 20449 | ||
<I/σ(I)> | 11.2 | 46.3 | 1 |
Completeness [%] | 95.5 | 90.2 | 97.7 |
Redundancy | 8.5 | 8.1 | 7.5 |
CC(1/2) | 0.999 | 0.999 | 0.497 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 27.3% Tacsimate pH 7.0, 0.15 M NaCl |