Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5QDL

PanDDA analysis group deposition -- Crystal structure of PTP1B in complex with compound_FMOPL000072a

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2016-09-25
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.92819
Spacegroup nameP 31 2 1
Unit cell lengths89.894, 89.894, 106.487
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution77.850 - 1.833
R-factor0.191
Rwork0.190
R-free0.21180
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.018
RMSD bond angle1.572
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]77.85177.8511.940
High resolution limit [Å]1.8305.4901.830
Rmerge0.0660.0270.961
Rmeas0.0730.0301.076
Total number of observations438098
Number of reflections84381317113549
<I/σ(I)>13.9347.031.34
Completeness [%]99.999.999.6
CC(1/2)0.9990.9980.518
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.5277well solution: 0.3 M magnesium acetate, 0.1 M HEPES pH 7.5, 0.1% beta-mercaptoethanol, 13-14% PEG 8000, 2% ethanol

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon