5QDL
PanDDA analysis group deposition -- Crystal structure of PTP1B in complex with compound_FMOPL000072a
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-09-25 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92819 |
| Spacegroup name | P 31 2 1 |
| Unit cell lengths | 89.894, 89.894, 106.487 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 77.850 - 1.833 |
| R-factor | 0.191 |
| Rwork | 0.190 |
| R-free | 0.21180 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.018 |
| RMSD bond angle | 1.572 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 77.851 | 77.851 | 1.940 |
| High resolution limit [Å] | 1.830 | 5.490 | 1.830 |
| Rmerge | 0.066 | 0.027 | 0.961 |
| Rmeas | 0.073 | 0.030 | 1.076 |
| Total number of observations | 438098 | ||
| Number of reflections | 84381 | 3171 | 13549 |
| <I/σ(I)> | 13.93 | 47.03 | 1.34 |
| Completeness [%] | 99.9 | 99.9 | 99.6 |
| CC(1/2) | 0.999 | 0.998 | 0.518 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 7.5 | 277 | well solution: 0.3 M magnesium acetate, 0.1 M HEPES pH 7.5, 0.1% beta-mercaptoethanol, 13-14% PEG 8000, 2% ethanol |






