5QBP
Crystal structure of Endothiapepsin-NAT17-347290a complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-12-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.099, 72.744, 52.191 |
Unit cell angles | 90.00, 109.06, 90.00 |
Refinement procedure
Resolution | 42.628 - 1.297 |
R-factor | 0.172 |
Rwork | 0.171 |
R-free | 0.20730 |
Structure solution method | Rigid Body |
RMSD bond length | 0.008 |
RMSD bond angle | 1.239 |
Data scaling software | XSCALE |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.627 | 42.627 | 1.380 |
High resolution limit [Å] | 1.300 | 3.880 | 1.300 |
Rmerge | 0.090 | 0.018 | 0.552 |
Rmeas | 0.105 | 0.021 | 0.647 |
Total number of observations | 271531 | ||
Number of reflections | 71978 | 2989 | 8070 |
<I/σ(I)> | 10.54 | 55.97 | 2.17 |
Completeness [%] | 91.4 | 98.5 | 63.6 |
CC(1/2) | 0.998 | 0.999 | 0.213 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 293 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000; crystals obtained by streak-seeding |