5Q5A
PanDDA analysis group deposition -- Crystal Structure of DCLRE1A after initial refinement with no ligand modelled (structure 111)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Detector technology | PIXEL |
| Collection date | 2016-09-29 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 51.770, 57.200, 115.110 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 31.860 - 2.260 |
| R-factor | 0.1951 |
| Rwork | 0.191 |
| R-free | 0.27310 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 5aho |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.565 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.27) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 31.860 | 31.860 | 2.320 |
| High resolution limit [Å] | 2.260 | 10.110 | 2.260 |
| Rmerge | 0.217 | 0.061 | 1.488 |
| Rmeas | 0.236 | 0.067 | 1.622 |
| Rpim | 0.093 | 0.028 | 0.641 |
| Total number of observations | 107526 | 1265 | 7594 |
| Number of reflections | 16656 | ||
| <I/σ(I)> | 6.7 | 22.5 | 1.2 |
| Completeness [%] | 99.9 | 97.1 | 99.9 |
| Redundancy | 6.5 | 5.6 | 6.3 |
| CC(1/2) | 0.992 | 0.995 | 0.645 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 30% PEG 1000, 0.1M MIB buffer |
