5Q48
PanDDA analysis group deposition -- Crystal Structure of DCLRE1A after initial refinement with no ligand modelled (structure 73)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Detector technology | PIXEL |
| Collection date | 2016-09-29 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 52.230, 57.350, 115.400 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 57.700 - 1.440 |
| R-factor | 0.2036 |
| Rwork | 0.202 |
| R-free | 0.22910 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 5aho |
| RMSD bond length | 0.024 |
| RMSD bond angle | 2.127 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.27) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 57.700 | 57.700 | 1.480 |
| High resolution limit [Å] | 1.440 | 6.440 | 1.440 |
| Rmerge | 0.092 | 0.057 | 1.697 |
| Rmeas | 0.100 | 0.063 | 1.869 |
| Rpim | 0.039 | 0.026 | 0.778 |
| Total number of observations | 414118 | 4980 | 26469 |
| Number of reflections | 63555 | ||
| <I/σ(I)> | 10.2 | 31.5 | 1 |
| Completeness [%] | 99.9 | 99.9 | 100 |
| Redundancy | 6.5 | 6 | 5.7 |
| CC(1/2) | 0.997 | 0.993 | 0.438 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 30% PEG 1000, 0.1M MIB buffer |
