5Q43
PanDDA analysis group deposition -- Crystal Structure of DCLRE1A after initial refinement with no ligand modelled (structure 67)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Detector technology | PIXEL |
| Collection date | 2016-09-29 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 52.340, 57.410, 115.180 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 57.590 - 1.470 |
| R-factor | 0.2092 |
| Rwork | 0.208 |
| R-free | 0.23600 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 5aho |
| RMSD bond length | 0.024 |
| RMSD bond angle | 2.089 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.27) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 57.590 | 57.590 | 1.510 |
| High resolution limit [Å] | 1.470 | 6.570 | 1.470 |
| Rmerge | 0.064 | 0.029 | 1.723 |
| Rmeas | 0.070 | 0.032 | 1.905 |
| Rpim | 0.028 | 0.013 | 0.799 |
| Total number of observations | 374477 | 4680 | 24287 |
| Number of reflections | 59526 | ||
| <I/σ(I)> | 15.6 | 52.6 | 1.2 |
| Completeness [%] | 99.4 | 99.7 | 98.5 |
| Redundancy | 6.3 | 6 | 5.7 |
| CC(1/2) | 0.999 | 0.999 | 0.614 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 30% PEG 1000, 0.1M MIB buffer |
