5Q42
PanDDA analysis group deposition -- Crystal Structure of DCLRE1A after initial refinement with no ligand modelled (structure 66)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Detector technology | PIXEL |
| Collection date | 2016-09-29 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 51.707, 57.026, 115.005 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 28.750 - 1.680 |
| R-factor | 0.1775 |
| Rwork | 0.175 |
| R-free | 0.21620 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 5aho |
| RMSD bond length | 0.019 |
| RMSD bond angle | 1.845 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.27) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 28.750 | 28.750 | 1.720 |
| High resolution limit [Å] | 1.680 | 7.500 | 1.680 |
| Rmerge | 0.050 | 0.019 | 0.855 |
| Rmeas | 0.054 | 0.021 | 0.929 |
| Rpim | 0.021 | 0.008 | 0.359 |
| Total number of observations | 257505 | 3149 | 17737 |
| Number of reflections | 39048 | ||
| <I/σ(I)> | 22.8 | 87.1 | 2.2 |
| Completeness [%] | 98.4 | 97.8 | 95.4 |
| Redundancy | 6.6 | 6.1 | 6.5 |
| CC(1/2) | 1.000 | 1.000 | 0.778 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 30% PEG 1000, 0.1M MIB buffer |
