5PZB
PanDDA analysis group deposition -- Crystal Structure of SP100 after initial refinement with no ligand modelled (structure 107)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2015-04-02 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 0.9200 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 127.620, 45.480, 83.420 |
| Unit cell angles | 90.00, 102.15, 90.00 |
Refinement procedure
| Resolution | 39.020 - 2.050 |
| R-factor | 0.1624 |
| Rwork | 0.160 |
| R-free | 0.20960 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 4ptb |
| RMSD bond length | 0.018 |
| RMSD bond angle | 1.766 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.3.11) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 39.020 | 39.020 | 2.100 |
| High resolution limit [Å] | 2.050 | 9.170 | 2.050 |
| Rmerge | 0.091 | 0.028 | 0.577 |
| Rmeas | 0.109 | 0.034 | 0.698 |
| Rpim | 0.058 | 0.018 | 0.386 |
| Total number of observations | 98823 | 1189 | 6630 |
| Number of reflections | 29089 | ||
| <I/σ(I)> | 11.8 | 43.5 | 2.2 |
| Completeness [%] | 98.1 | 96.7 | 97.1 |
| Redundancy | 3.4 | 3.3 | 3.1 |
| CC(1/2) | 0.996 | 0.998 | 0.715 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 0.1M MES pH 6.1 -- 20% PEG20K |
