5PF5
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 134)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 83.288, 96.695, 58.069 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.030 - 1.710 |
R-factor | 0.1895 |
Rwork | 0.188 |
R-free | 0.21890 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3g0l |
RMSD bond length | 0.026 |
RMSD bond angle | 2.073 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.030 | 29.030 | 1.740 |
High resolution limit [Å] | 1.710 | 9.060 | 1.710 |
Rmerge | 0.059 | 0.024 | 0.875 |
Rmeas | 0.065 | 0.026 | 0.964 |
Rpim | 0.026 | 0.010 | 0.394 |
Total number of observations | 162852 | 1245 | 5382 |
Number of reflections | 25312 | ||
<I/σ(I)> | 16.3 | 51.6 | 1.6 |
Completeness [%] | 98.8 | 97.4 | 78 |
Redundancy | 6.4 | 6.1 | 5.2 |
CC(1/2) | 0.999 | 0.999 | 0.795 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |