5PF1
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 130)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 83.248, 97.214, 58.436 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.220 - 1.780 |
R-factor | 0.1957 |
Rwork | 0.194 |
R-free | 0.22870 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3g0l |
RMSD bond length | 0.025 |
RMSD bond angle | 1.937 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.220 | 29.220 | 1.810 |
High resolution limit [Å] | 1.780 | 9.070 | 1.780 |
Rmerge | 0.100 | 0.040 | 0.740 |
Rmeas | 0.110 | 0.044 | 0.831 |
Rpim | 0.044 | 0.018 | 0.367 |
Total number of observations | 141997 | 1235 | 4165 |
Number of reflections | 22744 | ||
<I/σ(I)> | 9.7 | 28.9 | 1.2 |
Completeness [%] | 98.3 | 97.4 | 74.7 |
Redundancy | 6.2 | 6 | 4.3 |
CC(1/2) | 0.996 | 0.997 | 0.817 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |