5PEK
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 113)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2013-03-10 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 0.9200 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 82.481, 96.644, 57.978 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 28.990 - 1.790 |
| R-factor | 0.1922 |
| Rwork | 0.191 |
| R-free | 0.22270 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 3g0l |
| RMSD bond length | 0.023 |
| RMSD bond angle | 1.938 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.1.29) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 28.990 | 28.990 | 1.830 |
| High resolution limit [Å] | 1.790 | 8.960 | 1.790 |
| Rmerge | 0.066 | 0.023 | 1.096 |
| Rmeas | 0.072 | 0.026 | 1.196 |
| Rpim | 0.029 | 0.010 | 0.472 |
| Total number of observations | 139090 | 1272 | 6449 |
| Number of reflections | 21895 | ||
| <I/σ(I)> | 15.4 | 47.5 | 1.6 |
| Completeness [%] | 98.9 | 97.5 | 84.4 |
| Redundancy | 6.4 | 6.1 | 5.9 |
| CC(1/2) | 0.999 | 1.000 | 0.746 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |
