5PDI
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 74)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2013-03-10 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 0.9200 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 82.839, 96.948, 58.059 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 29.030 - 1.700 |
| R-factor | 0.1873 |
| Rwork | 0.186 |
| R-free | 0.21580 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 3g0l |
| RMSD bond length | 0.026 |
| RMSD bond angle | 2.095 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.1.29) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 29.030 | 29.030 | 1.730 |
| High resolution limit [Å] | 1.700 | 8.980 | 1.700 |
| Rmerge | 0.054 | 0.030 | 0.956 |
| Rmeas | 0.059 | 0.032 | 1.047 |
| Rpim | 0.023 | 0.012 | 0.417 |
| Total number of observations | 171152 | 1273 | 7221 |
| Number of reflections | 26050 | ||
| <I/σ(I)> | 16.8 | 49.5 | 1.9 |
| Completeness [%] | 99.3 | 97.3 | 89.6 |
| Redundancy | 6.6 | 6.1 | 5.9 |
| CC(1/2) | 0.999 | 0.999 | 0.761 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |
