5PD0
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 56)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2013-03-10 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 0.9200 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 81.918, 96.321, 57.674 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 28.840 - 1.840 |
| R-factor | 0.1956 |
| Rwork | 0.194 |
| R-free | 0.23300 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 3g0l |
| RMSD bond length | 0.022 |
| RMSD bond angle | 1.880 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.1.29) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 28.840 | 28.840 | 1.880 |
| High resolution limit [Å] | 1.840 | 9.020 | 1.840 |
| Rmerge | 0.085 | 0.043 | 0.931 |
| Rmeas | 0.093 | 0.047 | 1.022 |
| Rpim | 0.037 | 0.018 | 0.412 |
| Total number of observations | 123995 | 1237 | 5289 |
| Number of reflections | 19720 | ||
| <I/σ(I)> | 12.4 | 33.7 | 1.4 |
| Completeness [%] | 98.0 | 97.4 | 77.5 |
| Redundancy | 6.3 | 6.1 | 5.5 |
| CC(1/2) | 0.998 | 0.998 | 0.850 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |
