5PCL
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 42)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 81.966, 96.774, 57.784 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.890 - 2.190 |
R-factor | 0.2231 |
Rwork | 0.221 |
R-free | 0.26780 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3g0l |
RMSD bond length | 0.016 |
RMSD bond angle | 1.663 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.890 | 28.890 | 2.250 |
High resolution limit [Å] | 2.190 | 9.010 | 2.190 |
Rmerge | 0.131 | 0.036 | 5.665 |
Rmeas | 0.144 | 0.040 | 6.383 |
Rpim | 0.059 | 0.015 | 2.863 |
Total number of observations | 73006 | 1244 | 4243 |
Number of reflections | 11966 | ||
<I/σ(I)> | 10.8 | 29.6 | |
Completeness [%] | 97.8 | 97.4 | 82.6 |
Redundancy | 6.1 | 6.1 | 4.9 |
CC(1/2) | 0.987 | 0.999 | 0.877 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |