5PCH
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 38)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 82.656, 96.651, 58.005 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.020 - 1.750 |
R-factor | 0.1946 |
Rwork | 0.193 |
R-free | 0.22910 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3g0l |
RMSD bond length | 0.025 |
RMSD bond angle | 2.035 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.020 | 30.020 | 1.790 |
High resolution limit [Å] | 1.750 | 8.760 | 1.750 |
Rmerge | 0.047 | 0.024 | 0.774 |
Rmeas | 0.051 | 0.026 | 0.847 |
Rpim | 0.020 | 0.010 | 0.337 |
Total number of observations | 153896 | 1355 | 6664 |
Number of reflections | 23481 | ||
<I/σ(I)> | 20.6 | 64.4 | 2.2 |
Completeness [%] | 98.9 | 97.6 | 85.1 |
Redundancy | 6.6 | 6.2 | 5.7 |
CC(1/2) | 0.999 | 0.999 | 0.848 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |