5PBO
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 9)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 81.851, 97.145, 58.071 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.040 - 1.950 |
R-factor | 0.1738 |
Rwork | 0.172 |
R-free | 0.20950 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3g0l |
RMSD bond length | 0.022 |
RMSD bond angle | 1.920 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.040 | 29.040 | 1.990 |
High resolution limit [Å] | 1.950 | 8.920 | 1.950 |
Rmerge | 0.061 | 0.019 | 0.940 |
Rmeas | 0.066 | 0.020 | 1.035 |
Rpim | 0.026 | 0.008 | 0.423 |
Total number of observations | 110517 | 1273 | 5360 |
Number of reflections | 17146 | ||
<I/σ(I)> | 19.6 | 71.4 | 1.8 |
Completeness [%] | 98.7 | 97.5 | 83 |
Redundancy | 6.4 | 6.1 | 5.3 |
CC(1/2) | 0.999 | 1.000 | 0.766 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |