5PAQ
Crystal Structure of Factor VIIa in complex with 2-[(1-aminoisoquinolin-6-yl)amino]-2-(3-ethoxy-4-propan-2-yloxyphenyl)-1-(2-phenylpyrrolidin-1-yl)ethanone
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-10-26 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.000600 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 95.420, 95.420, 117.850 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.710 - 1.590 |
R-factor | 0.1746 |
Rwork | 0.173 |
R-free | 0.19400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.019 |
RMSD bond angle | 1.892 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.710 | 47.710 | 1.630 |
High resolution limit [Å] | 1.590 | 7.110 | 1.590 |
Rmerge | 0.085 | 0.025 | 1.741 |
Rmeas | 0.099 | 0.029 | 2.030 |
Total number of observations | 530004 | ||
Number of reflections | 139007 | 1537 | 10329 |
<I/σ(I)> | 8.59 | 26.38 | 0.86 |
Completeness [%] | 99.5 | 98.1 | 99.9 |
Redundancy | 3.81 | ||
CC(1/2) | 0.997 | 0.999 | 0.326 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 16 mg/ml protein in 20mM Tris/HCl pH 8.4, 5 mM benzamidine, 0.1 M NaCl, 50 mM CaCl2 mixed 1+1 with 32-35% AMMONIUM SULPHATE, 2% PEG 4000, 0.1 M Bicine-NaOH pH 8.5, 15% glycerol |