5P7V

Automated refinement of diffraction data obtained from an endothiapepsin crystal treated with fragment 328

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	BESSY BEAMLINE 14.3
Synchrotron site	BESSY
Beamline	14.3
Temperature [K]	100
Detector technology	CCD
Collection date	2014-01-22
Detector	MAR CCD 165 mm
Wavelength(s)	0.895
Spacegroup name	P 1 21 1
Unit cell lengths	45.340, 72.830, 52.877
Unit cell angles	90.00, 109.88, 90.00

Refinement procedure

Resolution	25.597 - 1.280
R-factor	0.1373
Rwork	0.136
R-free	0.15910
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	4y5l
RMSD bond length	0.007
RMSD bond angle	1.189
Data reduction software	XDS
Data scaling software	XDS
Phasing software	PHASER (2.5.7)
Refinement software	PHENIX

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	42.639		1.360
High resolution limit [Å]	1.280	3.830	1.280
Rmerge	0.050	0.016	0.570
Rmeas	0.057	0.018	0.656
Total number of observations	341800
Number of reflections	82855	3160	13281
<I/σ(I)>	18.5	70.37	2.48
Completeness [%]	99.5	98.5	99.1
Redundancy	4.125
CC(1/2)	0.999	1.000	0.784

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	4.6	290	0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000; crystal obtained by streak-seeding and soaked with 90 mM of fragment 328 with the SMILES code CN(C)CCCN1C=NC2=C(C(C)=C(C)O2)C1=N