5P3F

Automated refinement of diffraction data obtained from an endothiapepsin crystal treated with fragment 168

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	BESSY BEAMLINE 14.3
Synchrotron site	BESSY
Beamline	14.3
Temperature [K]	100
Detector technology	CCD
Collection date	2013-04-12
Detector	MAR CCD 165 mm
Wavelength(s)	0.8944
Spacegroup name	P 1 21 1
Unit cell lengths	45.267, 73.156, 52.706
Unit cell angles	90.00, 109.63, 90.00

Refinement procedure

Resolution	34.810 - 1.257
R-factor	0.1315
Rwork	0.130
R-free	0.15420
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	4y5l
RMSD bond length	0.007
RMSD bond angle	1.200
Data reduction software	XDS
Data scaling software	XDS
Phasing software	PHASER (2.5.7)
Refinement software	PHENIX

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	42.636		1.330
High resolution limit [Å]	1.260	3.760	1.260
Rmerge	0.069	0.026	0.676
Rmeas	0.079	0.030	0.783
Total number of observations	361427
Number of reflections	87213	3344	13603
<I/σ(I)>	14.7	50.24	2.28
Completeness [%]	99.2	99.4	96.1
Redundancy	4.144
CC(1/2)	0.999	0.999	0.689

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	4.6	290	0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000; crystal obtained by streak-seeding and soaked with 90 mM of fragment 168 with the SMILES code OCCNC(=O)\C=C\C1=CC=CS1