5P1V

Automated refinement of diffraction data obtained from an endothiapepsin crystal treated with fragment 114

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	BESSY BEAMLINE 14.2
Synchrotron site	BESSY
Beamline	14.2
Temperature [K]	100
Detector technology	CCD
Collection date	2013-01-23
Detector	MARMOSAIC 225 mm CCD
Wavelength(s)	0.91841
Spacegroup name	P 1 21 1
Unit cell lengths	45.251, 73.102, 52.809
Unit cell angles	90.00, 109.27, 90.00

Refinement procedure

Resolution	36.881 - 1.301
R-factor	0.1472
Rwork	0.146
R-free	0.16810
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	4y5l
RMSD bond length	0.007
RMSD bond angle	1.182
Data reduction software	XDS
Data scaling software	XDS
Phasing software	PHASER (2.5.7)
Refinement software	PHENIX

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	42.716		1.380
High resolution limit [Å]	1.300	3.890	1.300
Rmerge	0.052	0.028	0.477
Rmeas	0.060	0.032	0.554
Total number of observations	322062
Number of reflections	78761	3006	12429
<I/σ(I)>	16.41	47.27	2.9
Completeness [%]	99.0	98.2	97
Redundancy	4.089
CC(1/2)	0.999	0.998	0.824

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	4.6	290	0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000; crystal obtained by streak-seeding and soaked with 90 mM of fragment 114 with the SMILES code NC1=C(C#N)C(=NN1)N1CCCC1