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5P18

Automated refinement of diffraction data obtained from an endothiapepsin crystal treated with fragment 91

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyCCD
Collection date2012-11-16
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.91841
Spacegroup nameP 1 21 1
Unit cell lengths45.430, 73.155, 52.900
Unit cell angles90.00, 109.67, 90.00
Refinement procedure
Resolution36.928 - 1.349
R-factor0.1356
Rwork0.134
R-free0.16500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4y5l
RMSD bond length0.007
RMSD bond angle1.181
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER (2.5.7)
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]42.7791.430
High resolution limit [Å]1.3504.0301.350
Rmerge0.0870.0370.679
Rmeas0.1000.0420.780
Total number of observations299320
Number of reflections71469273811422
<I/σ(I)>11.3834.182.11
Completeness [%]99.699.298.6
Redundancy4.188
CC(1/2)0.9980.9970.740
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.62900.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000; crystal obtained by streak-seeding and soaked with 90 mM of fragment 91 with the SMILES code OC(=O)C1=CC=C(OC(F)(F)F)C=C1

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