5OTM
Crystal structure of human MTH1 in complex with O6-methyl-dGMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-03-02 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.91801 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.581, 67.237, 79.025 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.570 - 1.800 |
R-factor | 0.19861 |
Rwork | 0.196 |
R-free | 0.24688 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3zr1 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.326 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.570 | 1.840 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.085 | 0.823 |
Number of reflections | 29598 | 1705 |
<I/σ(I)> | 13.7 | 2.1 |
Completeness [%] | 98.9 | 97.7 |
Redundancy | 4.5 | 4.5 |
CC(1/2) | 0.999 | 0.756 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 3.7 | 293 | 26% w/v PEG6000, 0.1 M Sodium acetate trihydrate pH 3.7, 0.2 M LiSO4, 3 mM O6-methyl-2'-dGTP, 2 mM TCEP |