5OQN
Crystal structure of the S. cerevisiae condensin Ycg1-Brn1 subcomplex bound to DNA (short kleisin loop)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 89.149, 116.220, 155.518 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.343 - 3.150 |
R-factor | 0.2516 |
Rwork | 0.249 |
R-free | 0.28050 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5oqp |
RMSD bond length | 0.003 |
RMSD bond angle | 0.571 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.680 | 3.320 |
High resolution limit [Å] | 3.150 | 3.150 |
Rmerge | 0.198 | 1.115 |
Rpim | 0.059 | 0.401 |
Number of reflections | 28612 | 4129 |
<I/σ(I)> | 8.4 | 1.9 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.3 | 8.6 |
CC(1/2) | 0.999 | 0.287 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 280 | 4% (w/v) PEG 4000, 0.05 M Na citrate pH 5.6, 5 mM MgSO4 |