5OQ5
Structure of CHK1 8-pt. mutant complex with aminopyrimido-benzodiazepinone LRRK2 inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-03-04 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9282 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.400, 66.570, 55.080 |
Unit cell angles | 90.00, 101.58, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.400 |
R-factor | 0.1695 |
Rwork | 0.169 |
R-free | 0.18520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5oot |
RMSD bond length | 0.029 |
RMSD bond angle | 2.554 |
Data scaling software | Aimless (0.5.17) |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.280 | 33.280 | 1.420 |
High resolution limit [Å] | 1.380 | 6.170 | 1.380 |
Rmerge | 0.027 | 0.025 | 0.787 |
Rmeas | 0.033 | 0.031 | 1.009 |
Rpim | 0.019 | 0.018 | 0.624 |
Total number of observations | 171453 | ||
Number of reflections | 63516 | 713 | 4373 |
<I/σ(I)> | 18 | ||
Completeness [%] | 96.4 | 93.2 | 89.4 |
Redundancy | 2.7 | 2.8 | 2.1 |
CC(1/2) | 0.998 | 0.994 | 0.612 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 7% PEG 8000, 0.1 M MES buffer pH 6.5, 20% ethylene glycol |