5OPZ
Crystal structure of Serratia marcescens L-Ala D-Glu endopeptidase ChiX
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-12-12 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.977 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 40.627, 55.531, 51.780 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.780 - 1.340 |
R-factor | 0.09083 |
Rwork | 0.089 |
R-free | 0.12013 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.659 |
Data reduction software | XDS |
Data scaling software | Aimless (1.9.33) |
Phasing software | REFMAC (5.8.0124) |
Refinement software | REFMAC (5.8.0124) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 55.530 | 1.360 |
High resolution limit [Å] | 1.340 | 1.340 |
Rmerge | 0.084 | 0.523 |
Rpim | 0.052 | 0.340 |
Number of reflections | 50019 | 1385 |
<I/σ(I)> | 6.7 | 2.3 |
Completeness [%] | 90.5 | 50.4 |
Redundancy | 6.9 | 6.1 |
CC(1/2) | 0.998 | 0.829 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 0.1 M tris HCl pH 7.5 0.14 M trimethylamine-N-oxide 16% (w/v) polyethylene glycol monomethyl ether 2000 |