5OPC
Factor Inhibiting HIF (FIH) in complex with zinc and Vadadustat
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-01 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9763 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 86.799, 86.799, 149.520 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 75.067 - 2.300 |
R-factor | 0.1936 |
Rwork | 0.193 |
R-free | 0.21400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1h2k |
RMSD bond length | 0.003 |
RMSD bond angle | 0.522 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 86.800 | 2.420 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.148 | 1.780 |
Rpim | 0.036 | 0.435 |
Number of reflections | 26216 | 3748 |
<I/σ(I)> | 10.9 | 1.8 |
Completeness [%] | 100.0 | 100 |
Redundancy | 17.5 | 17.5 |
CC(1/2) | 0.998 | 0.689 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 300 | 0.1M HEPES pH7.5, 1.7M ammonium sulfate, 5.5% PEG 400 |