5OP4
Structure of CHK1 10-pt. mutant complex with aminopyrimidine LRRK2 inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-12-03 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.250, 66.210, 54.610 |
Unit cell angles | 90.00, 102.23, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.000 |
R-factor | 0.1686 |
Rwork | 0.167 |
R-free | 0.20470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5oop |
RMSD bond length | 0.019 |
RMSD bond angle | 1.902 |
Data scaling software | Aimless (0.1.27) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.550 | 41.550 | 1.960 |
High resolution limit [Å] | 1.910 | 8.540 | 1.910 |
Rmerge | 0.047 | 0.029 | 0.465 |
Rmeas | 0.058 | 0.037 | 0.583 |
Rpim | 0.034 | 0.022 | 0.347 |
Total number of observations | 64497 | ||
Number of reflections | 24046 | 270 | 1742 |
<I/σ(I)> | 14.2 | ||
Completeness [%] | 98.1 | 90.3 | 96.8 |
Redundancy | 2.7 | 2.5 | 2.5 |
CC(1/2) | 0.997 | 0.996 | 0.822 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 7% PEG 8000, 0.1 M MES buffer pH 6.5, 20% ethylene glycol |