5OKK
Conservatively refined structure of Gan1D-WT, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in complex with 6-phospho-beta-galactose
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU FR-X |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2014-01-01 |
| Detector | RIGAKU RAXIS HTC |
| Wavelength(s) | 1.54 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 107.260, 68.520, 153.060 |
| Unit cell angles | 90.00, 98.98, 90.00 |
Refinement procedure
| Resolution | 30.530 - 2.020 |
| R-factor | 0.1706 |
| Rwork | 0.169 |
| R-free | 0.21060 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5okj |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.843 |
| Data reduction software | iMOSFLM |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 31.200 | 2.060 |
| High resolution limit [Å] | 2.020 | 2.020 |
| Rmerge | 0.087 | 0.496 |
| Number of reflections | 72119 | |
| <I/σ(I)> | 7.7 | 2 |
| Completeness [%] | 100.0 | 99.9 |
| Redundancy | 4.3 | 4.3 |
| CC(1/2) | 0.996 | 0.893 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 16-19% PEG 8K, 3% MPD, 0.1M imidazole buffer pH 6.5 |
