5OKJ
Non-conservatively refined structure of Gan1D-WT, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in the C2 spacegroup
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU FR-X |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2013-12-01 |
| Detector | RIGAKU RAXIS HTC |
| Wavelength(s) | 1.54 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 108.020, 68.810, 152.770 |
| Unit cell angles | 90.00, 100.74, 90.00 |
Refinement procedure
| Resolution | 25.593 - 1.760 |
| R-factor | 0.2046 |
| Rwork | 0.203 |
| R-free | 0.24060 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5okb |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.832 |
| Data reduction software | iMOSFLM |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 25.600 | 1.790 |
| High resolution limit [Å] | 1.760 | 1.760 |
| Rmerge | 0.096 | 0.555 |
| Number of reflections | 99264 | 2346 |
| <I/σ(I)> | 4.7 | 0.7 |
| Completeness [%] | 90.8 | 43.4 |
| Redundancy | 3.1 | 2.2 |
| CC(1/2) | 0.990 | 0.682 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 16-19% PEG 8K, 3% MPD, 0.1M imidazole buffer pH 6.5 |
