5OHP
Crystal structure of USP30 (C77A) in complex with Lys6-linked diubiquitin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-02 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.96860 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 117.504, 117.504, 138.842 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 82.077 - 2.800 |
R-factor | 0.2176 |
Rwork | 0.216 |
R-free | 0.24940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ohk |
RMSD bond length | 0.005 |
RMSD bond angle | 0.695 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11rc1_2513)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 82.080 | 2.900 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.170 | 0.998 |
Rpim | 0.086 | 0.504 |
Number of reflections | 14395 | 1402 |
<I/σ(I)> | 6.99 | 1.83 |
Completeness [%] | 99.2 | 99.86 |
Redundancy | 4.7 | 4.8 |
CC(1/2) | 0.990 | 0.713 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 0.73 M sodium citrate, 0.1 M Hepes pH 7.0 |