Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5OHP

Crystal structure of USP30 (C77A) in complex with Lys6-linked diubiquitin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2016-10-02
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.96860
Spacegroup nameP 65 2 2
Unit cell lengths117.504, 117.504, 138.842
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution82.077 - 2.800
R-factor0.2176
Rwork0.216
R-free0.24940
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ohk
RMSD bond length0.005
RMSD bond angle0.695
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11rc1_2513))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]82.0802.900
High resolution limit [Å]2.8002.800
Rmerge0.1700.998
Rpim0.0860.504
Number of reflections143951402
<I/σ(I)>6.991.83
Completeness [%]99.299.86
Redundancy4.74.8
CC(1/2)0.9900.713
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72910.73 M sodium citrate, 0.1 M Hepes pH 7.0

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon