5OGS
Crystal structure of human AND-1 SepB domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-08-08 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | F 4 3 2 |
Unit cell lengths | 249.712, 249.712, 249.712 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.140 - 2.503 |
R-factor | 0.1781 |
Rwork | 0.176 |
R-free | 0.21070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4c8s |
RMSD bond length | 0.001 |
RMSD bond angle | 0.413 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MR-Rosetta |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.140 | 2.593 |
High resolution limit [Å] | 2.503 | 2.503 |
Rmerge | 0.123 | 1.494 |
Rpim | 0.031 | 0.404 |
Number of reflections | 23558 | 2288 |
<I/σ(I)> | 24.3 | 1.92 |
Completeness [%] | 99.9 | 99.52 |
Redundancy | 16.8 | 14.4 |
CC(1/2) | 0.999 | 0.563 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 MHEPES pH 7.0, 1.1M di-sodium malonate and 0.5 % (v/v) Jeffamine ED-2003, supplemented with 0.36 to 0.42 M sulfobetaine NDSB-195 |