5OD8
Crystal structure of the RA-associated mAb B2 (Fab fragment)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-08-14 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97949 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 137.410, 41.900, 97.490 |
Unit cell angles | 90.00, 108.37, 90.00 |
Refinement procedure
Resolution | 92.520 - 2.200 |
R-factor | 0.20195 |
Rwork | 0.200 |
R-free | 0.24254 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ncj |
RMSD bond length | 0.010 |
RMSD bond angle | 1.376 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 92.530 | 2.270 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.056 | 0.258 |
Rpim | 0.051 | 0.243 |
Number of reflections | 25795 | 1602 |
<I/σ(I)> | 10.8 | 3 |
Completeness [%] | 94.9 | 69.7 |
Redundancy | 3.2 | 2.1 |
CC(1/2) | 0.982 | 0.791 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 20% (w/v) PEG3350, 0.2 M Na3citrate |