5OA9
Human translation re-initiation complex containing eIF2D
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 273 |
Detector technology | PIXEL |
Collection date | 2016-09-03 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 50.720, 50.720, 197.390 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.670 - 1.800 |
R-factor | 0.193 |
Rwork | 0.190 |
R-free | 0.23100 |
Structure solution method | SAD |
RMSD bond length | 0.005 |
RMSD bond angle | 0.829 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.350 | 1.910 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.057 | 1.026 |
Number of reflections | 24936 | |
<I/σ(I)> | 14.9 | |
Completeness [%] | 99.8 | 99.9 |
Redundancy | 6.9 | |
CC(1/2) | 0.999 | 0.710 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.6 | 292 | 1:1 mix protein (50 mM HEPES-KOH pH 7.6, 150 mM KCl, 1 mM TCEP) with reservoir solution (100 mM HEPES-KOH pH 7.6, 25 mM sodium formate, 25 mM ammonium acetate, 25 mM sodium citrate tribasic, 25 mM sodium potassium tartrate, 10.7% PEG3350, 10.7% MPD, 10.7% PEG1000) |