Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5O1U

Structure of wildtype T.maritima PDE (TM1595) with AMP and Mn2+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2015-08-04
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.5498
Spacegroup nameP 21 21 21
Unit cell lengths55.310, 106.790, 134.120
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.113 - 1.900
R-factor0.1656
Rwork0.164
R-free0.20370
Structure solution methodSAD
RMSD bond length0.007
RMSD bond angle0.821
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareSHELXDE
Refinement softwarePHENIX ((1.12_2829: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.950
High resolution limit [Å]1.9001.900
Rmeas0.1000.855
Number of reflections115147
<I/σ(I)>14.35
Completeness [%]95.2
Redundancy6.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.82930.1 M HEPES/NaOH 25% (w/v) PEG4000 0.2M CaCl2 1mM MnCl2 1mM AMP

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon