Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5NYL

Crystal structure of an atypical poplar thioredoxin-like2.1 active site mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]110
Detector technologyCCD
Collection date2011-10-30
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97625
Spacegroup nameC 1 2 1
Unit cell lengths57.650, 36.300, 100.150
Unit cell angles90.00, 91.10, 90.00
Refinement procedure
Resolution33.380 - 1.500
R-factor0.1794
Rwork0.178
R-free0.20830
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)wild-type atypical trx-like2.1
RMSD bond length0.010
RMSD bond angle1.070
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.2)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.3801.530
High resolution limit [Å]1.5001.500
Rmerge0.0420.431
Rpim0.0390.410
Number of reflections328011377
<I/σ(I)>14.52
Completeness [%]98.083.8
Redundancy3.42.3
CC(1/2)0.9990.719
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2910.1M Na3 citrate, 20%(w/v) 2-propanol, 20%(w/v) PEG 4K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon