5NS8
Crystal structure of beta-glucosidase BglM-G1 mutant H75R from marine metagenome in complex with inhibitor 1-Deoxynojirimycin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-06-11 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 43 |
Unit cell lengths | 137.750, 137.750, 97.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.702 - 1.550 |
R-factor | 0.1613 |
Rwork | 0.161 |
R-free | 0.17220 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.782 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | PHENIX (dev_2621) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.702 | 48.702 | 1.590 |
High resolution limit [Å] | 1.550 | 6.930 | 1.550 |
Rmerge | 0.154 | 0.039 | 2.334 |
Rmeas | 0.160 | 0.041 | 2.429 |
Number of reflections | 263967 | 3063 | 19410 |
<I/σ(I)> | 11.97 | 54.94 | 0.8 |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 13.672 | 14.057 | 13.037 |
CC(1/2) | 0.999 | 0.999 | 0.394 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7 | 291 | 0.1M Na-HEPES, 2M AmmSO4, 2% PEG400 |