5NNI
Dimer structure of Sortilin ectodomain crystal form 2, 3.2 Angstrom
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06SA |
| Synchrotron site | SLS |
| Beamline | X06SA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2014-08-29 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.99998 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 79.842, 137.170, 147.560 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 62.195 - 3.210 |
| R-factor | 0.2288 |
| Rwork | 0.227 |
| R-free | 0.25480 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5nmt |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.686 |
| Data reduction software | MOSFLM |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.11_2567: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 62.200 | 3.325 |
| High resolution limit [Å] | 3.210 | 3.210 |
| Rmerge | 0.077 | 0.158 |
| Rpim | 0.033 | 0.158 |
| Number of reflections | 27112 | 2654 |
| <I/σ(I)> | 14.1 | 4.37 |
| Completeness [%] | 99.7 | 99.59 |
| Redundancy | 6.3 | 2 |
| CC(1/2) | 0.997 | 0.945 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5 | 291 | 0.2 M NH4Cl, 1 mM CaCl2 and 20% PEG 3350 (w/v), pH 5.0 |






