5NJ6
Crystal structure of a thermostabilised human protease-activated receptor-2 (PAR2) in ternary complex with Fab3949 and AZ7188 at 4.0 angstrom resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 200 |
Detector technology | PIXEL |
Collection date | 2014-09-27 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97717 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 164.144, 38.520, 159.660 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.130 - 4.000 |
R-factor | 0.265 |
Rwork | 0.263 |
R-free | 0.31900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ndd |
RMSD bond length | 0.006 |
RMSD bond angle | 0.800 |
Data reduction software | XDS (2014) |
Data scaling software | Aimless (0.3.11) |
Phasing software | PHASER (2014) |
Refinement software | BUSTER (2.11.6) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.130 | 4.470 |
High resolution limit [Å] | 4.000 | 4.000 |
Rmerge | 0.315 | 0.634 |
Rpim | 0.185 | 0.401 |
Number of reflections | 8440 | 2505 |
<I/σ(I)> | 4.2 | 2 |
Completeness [%] | 93.6 | 94.1 |
Redundancy | 3.3 | 3.3 |
CC(1/2) | 0.961 | 0.666 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 5.7 | 293 | 0.1M MES pH 5.5-6.2, 0.2M POTASSIUM / SODIUM TARTRATE, 30-35% (W/V) PEG400, 2% (W/V) 2,5-HEXANEDIOL |