5NIN
Crystal Structure of AKAP79 calmodulin binding domain peptide in complex with Ca2+/Calmodulin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-06-22 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9685 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 76.460, 76.460, 128.990 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.065 - 1.700 |
R-factor | 0.1659 |
Rwork | 0.164 |
R-free | 0.19440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1IWQ (85-148) |
RMSD bond length | 0.009 |
RMSD bond angle | 0.904 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 65.770 | 1.730 |
High resolution limit [Å] | 1.700 | 1.700 |
Rpim | 0.063 | 0.354 |
Number of reflections | 42359 | 2193 |
<I/σ(I)> | 10.1 | 3.1 |
Completeness [%] | 99.1 | 99.6 |
Redundancy | 7.4 | 7.5 |
CC(1/2) | 0.990 | 0.552 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.4 | 287 | 2.4 M ammonium sulphate, 50 mM citrate pH 5.4, 0.3 M NDSB-195 |