Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5NF4

The tip fimbrial protein Mfa3 from Porphyromonas gingivalis with C-terminal truncation.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyPIXEL
Collection date2015-07-22
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97623
Spacegroup nameP 32
Unit cell lengths80.183, 80.183, 116.022
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution44.520 - 1.746
R-factor0.1506
Rwork0.148
R-free0.17730
RMSD bond length0.010
RMSD bond angle1.245
Data reduction softwareXDS
Data scaling softwareSCALA (3.3.22)
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]69.44144.5201.840
High resolution limit [Å]1.7215.5201.750
Rmerge0.0330.365
Rmeas0.0430.0440.502
Rpim0.0280.0290.343
Total number of observations134723
Number of reflections79050
<I/σ(I)>12.216.22.1
Completeness [%]93.284.293.4
Redundancy1.71.81.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP52933% PGA, 8% PEG 8000, 0.3 M sodium formate, 0.12 M ammonium sulfate and 0.1 M sodium acetate, pH 5.0.

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon