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5NE7

Crystal structure of H60A mutant of Thermotoga maritima TmPEP1050 aminopeptidase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]100
Detector technologyPIXEL
Collection date2016-11-25
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9801
Spacegroup nameC 2 2 21
Unit cell lengths42.630, 114.220, 267.960
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.460 - 1.840
R-factor0.1684
Rwork0.167
R-free0.19520
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4p6y
RMSD bond length0.004
RMSD bond angle0.672
Data reduction softwareXDS (20160617)
Data scaling softwareXSCALE (20160617)
Phasing softwarePHASER (2.6.0)
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.46043.4601.890
High resolution limit [Å]1.8408.2201.840
Rmerge0.0870.0340.606
Rmeas0.0910.0350.637
Number of reflections572227383818
<I/σ(I)>16.5243.82.63
Completeness [%]99.498.891.7
Redundancy12.01512.3479.848
CC(1/2)0.9990.9990.891
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.5292TmPep1050 H60A (230 uM in 50 mM MOPS 0.5 M ammonium sulfate 1 mM cobalt chloride pH7.2) crystallised in 0.1 M sodium citrate 5 % PEG3350 pH 4.5

220113

PDB entries from 2024-05-22

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