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5NE1

L2 class A serine-beta-lactamase in complex with cyclic boronate 2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2016-04-30
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.92819
Spacegroup nameP 21 21 21
Unit cell lengths70.380, 85.690, 113.180
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.845 - 2.090
R-factor0.1776
Rwork0.176
R-free0.21430
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ne2
RMSD bond length0.010
RMSD bond angle1.249
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.1002.140
High resolution limit [Å]2.0902.090
Rpim0.1260.800
Number of reflections40861
<I/σ(I)>81.4
Completeness [%]99.399.5
Redundancy13.113.3
CC(1/2)0.9920.534
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291.15Crystal reagent (1.5 uL): 10% w/v PEG 20000, 20% v/v PEG MME 550, 0.02 M DL-Glutamic acid; 0.02 M DL-Alanine; 0.02 M Glycine; 0.02 M DL-Lysine; 0.02 M DL-Serine, 0.1 M bicine/Trizma base pH 8.5 Protein (1 uL): 42 mg/ml, 50 mM Tris pH 7.5, 150 mM NaCl, 5 mM imidazole, 1 mM TCEP

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