5NC8
Shewanella denitrificans Kef CTD in AMP bound form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-10-21 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9686 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 71.600, 71.600, 140.350 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.150 - 3.090 |
R-factor | 0.20536 |
Rwork | 0.203 |
R-free | 0.26042 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3EYW containing residues 410 - 570 (omitting all water molecules and ligands with non-conserved residues set to alanine) |
RMSD bond length | 0.010 |
RMSD bond angle | 1.558 |
Data reduction software | xia2 |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.620 | 3.170 |
High resolution limit [Å] | 3.090 | 3.090 |
Rmerge | 0.098 | 0.651 |
Number of reflections | 6976 | 425 |
<I/σ(I)> | 15.3 | |
Completeness [%] | 97.6 | 85.8 |
Redundancy | 6.2 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294 | 0.2M sodium malonate pH7.0 20% w/v PEG 3350 |