Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5N8D

Structure of the distal domain of mouse adenovirus 2 fibre, P21 native

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2014-01-31
DetectorDectris
Wavelength(s)1.0023
Spacegroup nameP 1 21 1
Unit cell lengths93.880, 100.600, 95.470
Unit cell angles90.00, 116.28, 90.00
Refinement procedure
Resolution29.660 - 1.800
R-factor0.16889
Rwork0.168
R-free0.20082
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5n83
RMSD bond length0.013
RMSD bond angle1.588
Data reduction softwareMOSFLM
Data scaling softwareAimless
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.6601.830
High resolution limit [Å]1.8001.800
Rmerge0.0780.334
Number of reflections1444357096
<I/σ(I)>7.12.1
Completeness [%]98.297.8
Redundancy2.82.9
CC(1/2)0.9890.857
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529410 mM Tris-HCl, 4.0 M ammonium formate, 0.1 M HEPES-NaOH

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon