5N56
Staphylococcus aureus Mn-dependent superoxide dismutase SodA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-04-24 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.881 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 51.275, 68.356, 56.724 |
Unit cell angles | 90.00, 99.45, 90.00 |
Refinement procedure
Resolution | 43.300 - 2.070 |
R-factor | 0.15415 |
Rwork | 0.150 |
R-free | 0.23888 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ids |
RMSD bond length | 0.014 |
RMSD bond angle | 1.563 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.300 | 2.120 |
High resolution limit [Å] | 2.070 | 2.070 |
Number of reflections | 21845 | 936 |
<I/σ(I)> | 9 | 1.5 |
Completeness [%] | 91.6 | 51.7 |
Redundancy | 3.5 | 1.6 |
CC(1/2) | 0.996 | 0.953 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.2 M MgCl2, 30 % PEG 4000, 0.1 M Tris pH 8.5 |