5N2U
Influenza D virus nucleoprotein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-06-30 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.96770 |
Spacegroup name | P 1 |
Unit cell lengths | 75.166, 85.166, 103.385 |
Unit cell angles | 91.20, 101.94, 101.02 |
Refinement procedure
Resolution | 39.710 - 2.400 |
R-factor | 0.205 |
Rwork | 0.202 |
R-free | 0.25200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3zdp |
RMSD bond length | 0.009 |
RMSD bond angle | 1.150 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.440 | 2.480 |
High resolution limit [Å] | 2.350 | 2.400 |
Number of reflections | 93538 | 8505 |
<I/σ(I)> | 7.78 | 1.05 |
Completeness [%] | 91.3 | 94.1 |
Redundancy | 2.2 | 2.2 |
CC(1/2) | 0.994 | 0.366 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 2.4 M sodium malonate pH 4 |