5N1Q
METHYL-COENZYME M REDUCTASE III FROM METHANOTHERMOCOCCUS THERMOLITHOTROPHICUS AT 1.9 A RESOLUTION
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-11-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.99979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 111.811, 77.224, 145.458 |
Unit cell angles | 90.00, 107.01, 90.00 |
Refinement procedure
Resolution | 45.630 - 1.900 |
R-factor | 0.1704 |
Rwork | 0.169 |
R-free | 0.19020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | MCR III from Methanotorris formicicus |
RMSD bond length | 0.009 |
RMSD bond angle | 1.040 |
Data reduction software | XDS |
Data scaling software | SCALA (3.6.22) |
Phasing software | MOLREP (11.2.08) |
Refinement software | BUSTER (2.10.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.360 | 2.000 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.087 | 0.577 |
Rpim | 0.053 | 0.346 |
Number of reflections | 185011 | 26774 |
<I/σ(I)> | 8.1 | 1.9 |
Completeness [%] | 99.2 | 98.7 |
Redundancy | 3.7 | 3.7 |
CC(1/2) | 0.994 | 0.804 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.6 | 291.15 | 1 ul of MCR III from M. thermolithotrophicus with a concentration of 35 mg/ml was mixed with 1 ul of reservoir solution. Best crystals with a yellow brick morphology appeared after a few days in 19% (w/v) polyethylene glycol 3350 and 200 mM MgCl2 in the absence of buffer. The crystals were immersed in a solution containing 19% (w/v) PEG 3350 and 200 mM MgCl2, 30% glycerol (v/v) prior to freezing in liquid nitrogen. |